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Confocal microscopy
Learn all about confocal microscopy and what it can do
What is confocal microscopy?
The confocal microscope scans a laser beam through a sample to excite molecules that are in focus. The molecules then emit photons, which are measured by a detector. A pinhole in front of the detector blocks out-of-focus light and hence improves image quality.
Confocal microscopy offers an improved resolution and signal-to-noise ratio over widefield. The ability to vary the height of the focal plane simultaneously while experimenting is also remarkably useful for 3D reconstruction of larger specimens. This method is more time-consuming than widefield in acquisition and image production and generally higher maintenance, in some cases there is also a tradeoff where some resolution is sacrificed to distinguish different structures in a given sample. Confocal Microscopy is an excellent method of optical imaging often preferred by researchers for applications involving visualization of genetic material or structural components of cells. It enables the assessment of the colocalization of structures and has had large ramifications in studies of the viability of cells.
Confocal microscopy offers an improved resolution and signal-to-noise ratio over widefield. The ability to vary the height of the focal plane simultaneously while experimenting is also remarkably useful for 3D reconstruction of larger specimens. This method is more time-consuming than widefield in acquisition and image production and generally higher maintenance, in some cases there is also a tradeoff where some resolution is sacrificed to distinguish different structures in a given sample. Confocal Microscopy is an excellent method of optical imaging often preferred by researchers for applications involving visualization of genetic material or structural components of cells. It enables the assessment of the colocalization of structures and has had large ramifications in studies of the viability of cells.
Figure 1: Three color confocal image of Cas9 binding to a single DNA molecule tethered between two optically trapped beads. Blue/green/red markers indicate the position of individual Cas9 complexes.
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C-Trap
Molecular biology as never seen before
The C-Trap® provides the world’s first dynamic single-molecule microscope to allow simultaneous manipulation and visualization of single-molecule interactions in real time.
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The integrated stress response promotes immune evasion through lipocalin 2
Webinar
November 3, 2026
01-01-20
Cancer cells activate the integrated stress response (ISR) to adapt to stress and resist therapy. ISR signals converge on activating transcription factor 4 (ATF4), which controls cell-intrinsic transcriptional programs that are involved in metabolic adaptation, survival and growth. However, whether the ISR–ATF4 axis influences anti-tumour immune responses remains mostly unknown. Here we show that loss of ATF4 decreases tumour progression considerably in immunocompetent mice, but not in immunocompromised ones, by enhancing T cell-dependent anti-cancer immune responses. An unbiased genetic screen of ATF4-regulated genes identifies lipocalin 2 (LCN2) as the principal ATF4-dependent effector that impairs anti-tumour immunity by favouring infiltration with immunosuppressive interstitial macrophages. Furthermore, we find that LCN2 promotes T cell exclusion and immune evasion in preclinical mouse models, and correlates with decreased T cell infiltration in patients with lung and pancreatic adenocarcinomas. Anti-LCN2 antibodies promote robust anti-tumour T cell responses in mouse models of aggressive solid tumours. Our study shows that the ATF4–LCN2 axis has a cell-extrinsic role in suppressing anti-cancer immunity, and could pave the way for an immunotherapy approach that targets LCN2.
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Enhancing efficacy against clear cell renal cell carcinoma through format-tuning of bispecific T cell engagers
Scientific update
January 29, 2025
01-01-20
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Cell Avidity: a key to accelerate IND filing in cell therapy drug development
Whitepaper
July 1, 2023
01-01-20
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Accelerate your cell engager discovery with high throughput measurements of Cell Avidity
Application note
June 1, 2023
01-01-20
T cells play a pivotal role in tumor immunosurveillance. Multispecific cell engagers (CEs) have been adopted in the field of immuno-oncology to redirect T cells toward cancer cells, thereby unleashing the anti-tumor potential of the patient’s immune system. CE-mediated cell binding induces T cell activation and the formation of an immunological synapse, which is a prerequisite for effective tumor cell lysis.
The strength of the initial binding events between a T cell and a tumor cell dictates the efficiency of the anti-tumor response. Assessing cell avidity, i.e. the total intercellular interaction strength between two cells, gives crucial insights into the efficacy of CEs as anti-tumor therapeutic agents.
Here, we deploy LUMICKS’ high throughput avidity measurement (HTAM) technology to measure CE-induced cell avidity in a high throughput manner. We demonstrate the assay performance characteristics, i.e. specificity, precision, and range, via CE titration experiments in the context of a Jurkat T cell model system. We find that the HTAM CA assay is suitable for candidate screening in high throughput, with high sensitivity and precision.
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Cell Therapy Case Study Collection
Brochure
September 8, 2025
01-01-20
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