Study cytoskeletal motors in real-time at the nanoscale

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Dynamic Single-Molecule

Revealing biomolecular insights never before available

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Why Dynamic Single-Molecule?

The forces and dynamics behind cellular architecture and transport

The cytoskeleton is the engine and scaffold of the cell — powering movement, shaping form, and transporting cargo. Yet, traditional ensemble techniques often obscure the precise steps and forces behind these dynamic processes. Without the ability to directly manipulate filaments and motors while observing their real-time behavior, key mechanistic insights remain out of reach.
Overcome these challenges with Dynamic Single-Molecule technology through:
  • Visualize the assembly, disassembly, and dynamic interactions of cytoskeletal filaments in real time
  • Measure the forces generated by motor proteins and their interactions with filaments
  • Uncover how filament organization and motor activity drive intracellular transport, cell shape, and division
  • Investigation of motor protein stepping mechanics along cytoskeletal filaments

    Here, a three-bead assay is utilized to study the stepping behavior of a molecular motor. Two optically-trapped beads hold actin tight and a third myosin-coated bead is immobilized on the glass surface of a flow cell. We can visualize the fluorescently-tagged actin filaments using correlated confocal microscopy and perform simultaneously distance measurements. This offers the possibility to track the activity of molecular motors along cytoskeletal proteins and determine their thermodynamic properties at the single molecule level.

    Case study


    In this assay, we investigated the displacement of actin with respect to wild-type myosin-VI by measuring the correlated displacements of the two beads trapped in the dual optical trap. Figure 1 shows that myosin pulls the actin filament in a unidirectional manner with a measurable force.

    The exact kinetics of the motor can be observed by measuring the relative translocation of the filament with respect to the motor and the related forces. From the resulting force–time traces, we can derive the speed and processivity of the motor.

    Sample courtesy of Prof. Dr. Margaret Titus at the University of Minnesota

    1 Motility of myosin VI as detected by the three-bead assay. Data acquired shown at 50 kHz (gray) and 20 Hz (red).

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    Stepping of filaments and motors at the surface

    The C-Trap enables you to construct and test a variety of assays to understand the molecular mechanisms of motor-filament interactions and gain insights into their regulation. In this experiment we tethered a kinesin motor to a bead and placed the motor on a microtubule which we visualized with label-free IRM.

    Case study


    We can follow the motor’s activity in all 3 dimensions as it moves over the filament and measure the distance, velocity, and (stall-) force of a motor attached to a bead, also under the influence of other molecules and loads.

    Figure 2 shows a single kinesin motor stepping along a microtubule. Steps, 8 nm in size, were collected with 2D feedback along the microtubule direction at stall force of 1 pN.

    In Figure 3 we can observe 2 events during which the kinesin motor detaches from the microtubule at a force of approximately 2 pN.

    Data courtesy of Dr. Paul Ruijgrok and Dr. Zev Bryant at Stanford University.

    3 Motility of kinesin measured without a force clamp.

    2 Single kinesin stepping along a microtubule at a stall force of 1 pN.

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    Force-extension, manipulation, and visualization of polymers and protein filaments

    In this experiment, a vimentin filament is tethered between two optically trapped beads. We can obtain the force-distance curve and determine the mechanical properties of the microtubule by simultaneously stretching the filament and measuring the force and the extension.

    Case study

    Sarah Köster, PhD
    Professor

    The measured data in Figures 1 and 2 show the extension of a vimentin intermediate filament. The force-distance curve is measured while stretching and relaxing the intermediate filament at a slow speed, allowing for structural equilibrium. The retraction curve shows clear hysteresis due to the remodeling of the vimentin filament under high tension. Simultaneous confocal fluorescence imaging of the vimentin filament is used to resolve this intra-molecular remodeling.

    Combining optical tweezers with simultaneous fluorescence measurements allows correlating the mechanical properties of the microtubule with local information.

    2 Measurements of forces exerted on the cell membrane over time.

    1 Confocal microscopy image showing cellular changes upon manipulation of the bead.

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    Visualization of filament-filament interactions

    Here we use a quadruple trap configuration to trap beads and catch two fluorescently labeled microtubules in between. We then arrange the two microtubules in a crossed pattern and drag one microtubule across the other with a known force.

    Case study

    Zdenek Lansky, PhD
    Group Leader

    Figure 1 shows the interaction between two fluorescently labeled microtubules, as one microtubule is dragged across the other with a known force. In the middle and left snapshot, we can observe that the friction force between the filaments causes one microtubule to adopt a curved conformational structure. When we stop the movement of the microspheres the microtubule slowly relaxes (right).

    The surface properties of these filaments, the electrostatic and ionic forces and specific interactions, can generate friction when two filaments interact. This friction can be measured using a device such as the C-Trap® configured for quadruple optical trapping.

    1 Two fluorescent microtubules held by two beads in a crossed pattern. One microtubule is dragged across the other with a known force.

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    C-Trap

    Biomolecular interactions re-imagined

    The C-Trap® provides the world’s first dynamic single-molecule microscope to allow simultaneous manipulation and visualization of single-molecule interactions in real time.

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    Publications

    Understand the key insights by reading up on our latest publications

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    Text Link

    Supported Natural Membranes on Microspheres for Protein–Protein Interaction Studies

    Cheppali S.,
    2022
    ACS Appl. Mater. Interfaces
    Author Empty
    Cytoskeletal Structure and Transport
    Publication
    Text Link

    Tetraspanin 4 stabilizes membrane swellings and facilitates their maturation into migrasomes

    Dharan R.,
    2023
    Nature Communications
    Author Empty
    Cytoskeletal Structure and Transport
    Publication
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    Membrane Tension Inhibits Lipid Mixing by Increasing the Hemifusion Stalk Energy

    Shendrik, P. et al.
    2023
    ACS Nano
    Author Empty
    Cytoskeletal Structure and Transport
    Publication

    Relevant resources

    Learn as much as you can by reading up on our application notes or marathoning our webinars.

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    Dynamic single-molecule experiments expose catch bonds as key to cell strength and flexibility

    Dynamic single-molecule experiments expose catch bonds as key to cell strength and flexibility

    Scientific update

    Cytoskeletal Structure and Transport

    Cell mechanics with the C-Trap – cellular tension propagation revisited

    Cell mechanics with the C-Trap – cellular tension propagation revisited

    Scientific update

    Cytoskeletal Structure and Transport

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    Unparalleled approaches to understand cytoskeletal processes

    Unparalleled approaches to understand cytoskeletal processes

    Application note
    01-01-20
    01-01-20

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